Import of pkgsrc-2015Q1

parallel/dsh/Makefile

@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.3 2014/01/22 06:21:30 cheusov Exp $
+# $NetBSD: Makefile,v 1.4 2014/04/23 13:51:13 fhajny Exp $
 #
 
 DISTNAME=	dsh-0.25.10
@@ -20,6 +20,8 @@ CONF_FILES=		${EGDIR}/dsh.conf ${PKG_SYSCONFDIR}/dsh.conf
 
 INSTALL_MAKE_FLAGS=	sysconfdir=${EGDIR}
 
+LIBS=			-liconv -lintl
+
 .include "../../devel/gettext-lib/buildlink3.mk"
 .include "../../devel/libdshconfig/buildlink3.mk"
 .include "../../mk/bsd.pkg.mk"

parallel/ganglia-monitor-core/Makefile

@@ -1,9 +1,9 @@
-# $NetBSD: Makefile,v 1.51 2013/12/01 10:18:03 ryoon Exp $
+# $NetBSD: Makefile,v 1.52 2014/05/05 00:48:16 ryoon Exp $
 #
 
 DISTNAME=		ganglia-3.1.2
 PKGNAME=		ganglia-monitor-core-3.1.2
-PKGREVISION=		23
+PKGREVISION=		24
 CATEGORIES=		net parallel
 MASTER_SITES=		${MASTER_SITE_SOURCEFORGE:=ganglia/}
 

parallel/gridscheduler/Makefile

@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.13 2014/02/12 23:18:28 tron Exp $
+# $NetBSD: Makefile,v 1.16 2015/03/19 19:15:37 joerg Exp $
 
 PKGNAME=	gridscheduler-2011.11
 DISTNAME=	GE2011.11
-PKGREVISION=	7
+PKGREVISION=	8
 CATEGORIES=	parallel sysutils
 MASTER_SITES=	${MASTER_SITE_SOURCEFORGE:=gridscheduler/}
 
@@ -13,11 +13,13 @@ COMMENT=	Open Grid Scheduler/Grid Engine resource management system
 BUILD_DEPENDS+=	{standalone-tcsh,tcsh}-[0-9]*:../../shells/tcsh
 
 # Not 64-bit clean; crashes during build.
-NOT_FOR_PLATFORM=	${LP64PLATFORMS}
+BROKEN_ON_PLATFORM=	${LP64PLATFORMS}
 
 GNU_CONFIGURE=	yes
 USE_TOOLS+=	gmake perl:run
 
+OVERRIDE_DIRDEPTH=	6
+
 CFLAGS+=		-D${UPPER_OPSYS}
 CONFIGURE_ENV+=		REMOTE=sge
 CONFIGURE_ENV+=		CFLAGS=${CFLAGS:M*:Q}

parallel/hwloc/Makefile

@@ -1,7 +1,8 @@
-# $NetBSD: Makefile,v 1.14 2013/07/16 16:25:32 manu Exp $
+# $NetBSD: Makefile,v 1.15 2014/05/05 00:48:16 ryoon Exp $
 
 DISTNAME=	hwloc-1.7.1
 #PKGREVISION=	1
+PKGREVISION=	1
 CATEGORIES=	parallel
 MASTER_SITES=	http://www.open-mpi.org/software/hwloc/v1.7/downloads/
 EXTRACT_SUFX=	.tar.bz2

parallel/mpi-ch/Makefile

@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.77 2013/05/31 12:41:45 wiz Exp $
+# $NetBSD: Makefile,v 1.78 2014/05/29 23:37:14 wiz Exp $
 
 DISTNAME=	mpich-3.0.4
-PKGREVISION=	1
+PKGREVISION=	2
 CATEGORIES=	parallel
 MASTER_SITES=	http://www.mpich.org/static/tarballs/${PKGVERSION_NOREV}/
 

parallel/openmpi/Makefile

@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.25 2014/02/18 22:21:33 joerg Exp $
+# $NetBSD: Makefile,v 1.30 2015/01/15 20:51:11 dholland Exp $
 
 DISTNAME=	openmpi-1.6.4
-PKGREVISION=	1
+PKGREVISION=	4
 CATEGORIES=	parallel
 MASTER_SITES=	http://www.open-mpi.org/software/ompi/v1.6/downloads/
 EXTRACT_SUFX=	.tar.bz2
@@ -20,7 +20,6 @@ LIBTOOL_OVERRIDE=	${WRKSRC}/libtool \
 SHLIBTOOL_OVERRIDE=	${WRKSRC}/config/libtool.m4 \
 			${WRKSRC}/opal/libltdl/m4/libtool.m4
 
-CONFIGURE_ARGS+=	--without-sge
 CONFIGURE_ARGS+=	--without-slurm
 CONFIGURE_ARGS+=	--enable-contrib-no-build=vt # in separate package
 CONFIGURE_ARGS+=	--with-libltdl=external # use our libltdl
@@ -38,9 +37,20 @@ USE_TOOLS+=		perl:run
 
 TEST_TARGET=	check
 
-.if ${OPSYS} == "DragonFly" || ${OPSYS} == "FreeBSD" || \
+PLIST_VARS+=	linux loadleveler notifier-smtp ofud openib shm
+
+.if ${OPSYS} == "Linux"
+PLIST.shm=		yes
+PLIST.linux=		yes
+PLIST.openib=		yes
+PLIST.loadleveler=	yes
+PLIST.ofud=		yes
+PLIST.notifier-smtp=	yes
+.elif ${OPSYS} == "AIX"
+PLIST.loadleveler=	yes
+.elif ${OPSYS} == "DragonFly" || ${OPSYS} == "FreeBSD" || \
     (${OPSYS} == "NetBSD" && exists(/var/shm))
-PLIST_SRC+=		PLIST.shm
+PLIST.shm=		yes
 .endif
 
 ## Just in case you'll need it...

parallel/openmpi/PLIST

@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.11 2013/02/24 01:22:36 asau Exp $
+@comment $NetBSD: PLIST,v 1.13 2015/01/15 20:51:11 dholland Exp $
 bin/mpiCC
 bin/mpic++
 bin/mpicc
@@ -69,12 +69,16 @@ lib/libmca_common_sm.la
 lib/libmpi.la
 lib/libmpi_cxx.la
 lib/libmpi_f77.la
+${PLIST.f90}lib/libmpi_f90.la
 lib/libompitrace.la
 lib/libopen-pal.la
 lib/libopen-rte.la
+${PLIST.f90}lib/mpi.mod
 lib/openmpi/libompi_dbg_msgq.la
 lib/openmpi/mca_allocator_basic.la
 lib/openmpi/mca_allocator_bucket.la
+${PLIST.ofud}lib/openmpi/mca_btl_ofud.la                
+${PLIST.openib}lib/openmpi/mca_btl_openib.la              
 lib/openmpi/mca_bml_r2.la
 lib/openmpi/mca_btl_self.la
 lib/openmpi/mca_btl_sm.la
@@ -110,6 +114,7 @@ lib/openmpi/mca_mpool_fake.la
 lib/openmpi/mca_mpool_rdma.la
 lib/openmpi/mca_mpool_sm.la
 lib/openmpi/mca_notifier_command.la
+${PLIST.notifier-smtp}lib/openmpi/mca_notifier_smtp.la           
 lib/openmpi/mca_notifier_syslog.la
 lib/openmpi/mca_odls_default.la
 lib/openmpi/mca_oob_tcp.la
@@ -122,8 +127,11 @@ lib/openmpi/mca_pml_cm.la
 lib/openmpi/mca_pml_csum.la
 lib/openmpi/mca_pml_ob1.la
 lib/openmpi/mca_pml_v.la
+${PLIST.linux}lib/openmpi/mca_pstat_linux.la
 lib/openmpi/mca_pubsub_orte.la
 lib/openmpi/mca_ras_cm.la
+${PLIST.sge}lib/openmpi/mca_ras_gridengine.la
+${PLIST.loadleveler}lib/openmpi/mca_ras_loadleveler.la
 lib/openmpi/mca_rcache_vma.la
 lib/openmpi/mca_rmaps_load_balance.la
 lib/openmpi/mca_rmaps_rank_file.la
@@ -139,7 +147,9 @@ lib/openmpi/mca_routed_linear.la
 lib/openmpi/mca_routed_radix.la
 lib/openmpi/mca_routed_slave.la
 lib/openmpi/mca_shmem_mmap.la
+${PLIST.shm}lib/openmpi/mca_shmem_posix.la
 lib/openmpi/mca_shmem_sysv.la
+${PLIST.linux}lib/openmpi/mca_sysinfo_linux.la
 lib/openmpi/mca_topo_unity.la
 lib/openmpi/mca_vprotocol_pessimist.la
 lib/pkgconfig/ompi-c.pc
@@ -484,7 +494,9 @@ man/man7/opal_crs.7
 man/man7/orte_filem.7
 man/man7/orte_hosts.7
 man/man7/orte_snapc.7
+${PLIST.openib}share/openmpi/amca-param-sets/btl-openib-benchmark
 share/openmpi/amca-param-sets/example.conf
+${PLIST.linux}share/openmpi/doc/COPYRIGHT-ptmalloc2.txt
 share/openmpi/examples/openmpi-default-hostfile
 share/openmpi/examples/openmpi-mca-params.conf
 share/openmpi/examples/openmpi-totalview.tcl
@@ -499,6 +511,8 @@ share/openmpi/help-mca-op-base.txt
 share/openmpi/help-mca-param.txt
 share/openmpi/help-mpi-api.txt
 share/openmpi/help-mpi-btl-base.txt
+${PLIST.openib}share/openmpi/help-mpi-btl-openib-cpc-base.txt
+${PLIST.openib}share/openmpi/help-mpi-btl-openib.txt
 share/openmpi/help-mpi-btl-sm.txt
 share/openmpi/help-mpi-btl-tcp.txt
 share/openmpi/help-mpi-coll-sm.txt
@@ -523,8 +537,10 @@ share/openmpi/help-opal-carto-file.txt
 share/openmpi/help-opal-crs-base.txt
 share/openmpi/help-opal-crs-none.txt
 share/openmpi/help-opal-maffinity-hwloc.txt
+${PLIST.linux}share/openmpi/help-opal-memory-linux.txt
 share/openmpi/help-opal-runtime.txt
 share/openmpi/help-opal-shmem-mmap.txt
+${PLIST.shm}share/openmpi/help-opal-shmem-posix.txt
 share/openmpi/help-opal-shmem-sysv.txt
 share/openmpi/help-opal-util.txt
 share/openmpi/help-opal-wrapper.txt
@@ -533,6 +549,7 @@ share/openmpi/help-orte-filem-base.txt
 share/openmpi/help-orte-filem-rsh.txt
 share/openmpi/help-orte-iof.txt
 share/openmpi/help-orte-notifier-command.txt
+${PLIST.notifier-smtp}share/openmpi/help-orte-notifier-smtp.txt
 share/openmpi/help-orte-odls-base.txt
 share/openmpi/help-orte-ps.txt
 share/openmpi/help-orte-rmaps-base.txt
@@ -549,8 +566,10 @@ share/openmpi/help-orterun.txt
 share/openmpi/help-plm-base.txt
 share/openmpi/help-plm-rsh.txt
 share/openmpi/help-ras-base.txt
+${PLIST.sge}share/openmpi/help-ras-gridengine.txt
 share/openmpi/help-regex.txt
 share/openmpi/help-rmaps_rank_file.txt
+${PLIST.openib}share/openmpi/mca-btl-openib-device-params.ini
 share/openmpi/mpiCC-wrapper-data.txt
 share/openmpi/mpic++-wrapper-data.txt
 share/openmpi/mpicc-wrapper-data.txt

parallel/openmpi/PLIST.f90

@@ -1,2 +0,0 @@
-lib/libmpi_f90.la
-lib/mpi.mod

parallel/openmpi/PLIST.shm

@@ -1,3 +0,0 @@
-@comment $NetBSD: PLIST.shm,v 1.1 2014/02/18 22:21:33 joerg Exp $
-lib/openmpi/mca_shmem_posix.la
-share/openmpi/help-opal-shmem-posix.txt

parallel/openmpi/options.mk

@@ -1,7 +1,7 @@
-# $NetBSD: options.mk,v 1.6 2014/02/19 09:44:56 jperkin Exp $
+# $NetBSD: options.mk,v 1.8 2015/01/15 20:26:47 dholland Exp $
 
 PKG_OPTIONS_VAR=	PKG_OPTIONS.openmpi
-PKG_SUPPORTED_OPTIONS=	debug f90
+PKG_SUPPORTED_OPTIONS=	debug f90 sge
 
 .include "../../mk/bsd.options.mk"
 
@@ -9,13 +9,14 @@ PKG_SUPPORTED_OPTIONS=	debug f90
 CONFIGURE_ARGS+=	--enable-debug
 .endif
 
+PLIST_VARS+=		f90 sge
 
 .if !empty(PKG_OPTIONS:Mf90)
 GCC_REQD+=		4.7
 GCCDIR=			${PREFIX}/gcc47
 CONFIGURE_ARGS+=	--enable-mpi-f90
 CONFIGURE_ENV+=		FC=${GCCDIR}/bin/gfortran
-PLIST_SRC+=		PLIST.f90
+PLIST.f90=		yes
 
 SUBST_CLASSES+=		f90
 SUBST_STAGE.f90=	post-configure
@@ -27,4 +28,10 @@ SUBST_SED.f90+=		-e 's,^linker_flags=,linker_flags= -L${GCCDIR}/lib ,'
 CONFIGURE_ARGS+=	--disable-mpi-f90
 .endif
 
-PLIST_SRC+=		PLIST
+
+.if !empty(PKG_OPTIONS:Msge)
+CONFIGURE_ARGS+=        --with-sge
+PLIST.sge=		yes
+.else
+CONFIGURE_ARGS+=	--without-sge
+.endif

parallel/p5-Parallel-Pvm/Makefile

@@ -1,10 +1,9 @@
-# $NetBSD: Makefile,v 1.22 2013/05/31 12:41:45 wiz Exp $
+# $NetBSD: Makefile,v 1.24 2014/10/09 13:44:53 wiz Exp $
 #
 
 DISTNAME=	Parallel-Pvm-1.4.0
 PKGNAME=	p5-${DISTNAME}
-PKGREVISION=	5
-SVR4_PKGNAME=	p5pvm
+PKGREVISION=	6
 CATEGORIES=	parallel perl5
 MASTER_SITES=	${MASTER_SITE_PERL_CPAN:=Parallel/}
 

parallel/paexec/Makefile

@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.14 2013/08/26 16:20:03 cheusov Exp $
+# $NetBSD: Makefile,v 1.16 2014/08/14 06:15:54 cheusov Exp $
 #
 
-DISTNAME=	paexec-0.19.1
+DISTNAME=	paexec-1.0.1
 CATEGORIES=	parallel sysutils
 MASTER_SITES=	${MASTER_SITE_SOURCEFORGE:=paexec/} \
 		http://mova.org/~cheusov/pub/paexec/
@@ -11,7 +11,7 @@ HOMEPAGE=	http://sourceforge.net/projects/paexec
 COMMENT=	Distributes tasks over network or CPUs
 LICENSE=	mit
 
-BUILD_DEPENDS+=		mk-configure>=0.20.0:../../devel/mk-configure
+BUILD_DEPENDS+=		mk-configure>=0.27.0:../../devel/mk-configure
 DEPENDS+=		runawk>=1.4.3:../../lang/runawk
 
 REPLACE_INTERPRETER+=	runawk

parallel/paexec/PLIST

@@ -1,9 +1,11 @@
-@comment $NetBSD: PLIST,v 1.3 2013/08/25 14:59:17 cheusov Exp $
+@comment $NetBSD: PLIST,v 1.4 2014/07/13 16:25:29 cheusov Exp $
 bin/paexec
 bin/paexec_reorder
+bin/pareorder
 man/man1/paexec.1
 man/man1/paexec_reorder.1
-share/doc/paexec/COPYRIGHT
+man/man1/pareorder.1
+share/doc/paexec/LICENSE
 share/doc/paexec/NEWS
 share/doc/paexec/README
 share/doc/paexec/TODO

parallel/paexec/distinfo

@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.7 2013/08/26 16:20:03 cheusov Exp $
+$NetBSD: distinfo,v 1.9 2014/08/14 06:15:54 cheusov Exp $
 
-SHA1 (paexec-0.19.1.tar.gz) = af903d2be89a2f564d96830ec9c9d0895b59a562
-RMD160 (paexec-0.19.1.tar.gz) = 0cba593838a66d77622be422677dacfd0a646dd1
-Size (paexec-0.19.1.tar.gz) = 147668 bytes
+SHA1 (paexec-1.0.1.tar.gz) = a86ed9b5cd7bf793ea92bfdd4360a96ec4a5a961
+RMD160 (paexec-1.0.1.tar.gz) = d54f46fdd093a5da90d506dc7453ae1cebd28038
+Size (paexec-1.0.1.tar.gz) = 141777 bytes

parallel/parallel/Makefile

@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.8 2013/05/31 12:41:45 wiz Exp $
+# $NetBSD: Makefile,v 1.9 2014/05/29 23:37:14 wiz Exp $
 #
 
 DISTNAME=	parallel-20130122
-PKGREVISION=	1
+PKGREVISION=	2
 CATEGORIES=	parallel
 MASTER_SITES=	${MASTER_SITE_GNU:=parallel/}
 EXTRACT_SUFX=	.tar.bz2

parallel/pdsh/Makefile

@@ -1,7 +1,8 @@
-# $NetBSD: Makefile,v 1.1 2014/01/10 21:30:09 cheusov Exp $
+# $NetBSD: Makefile,v 1.2 2014/05/29 23:37:14 wiz Exp $
 #
 
 DISTNAME=	pdsh-2.29
+PKGREVISION=	1
 CATEGORIES=	parallel
 MASTER_SITES=	http://pdsh.googlecode.com/files/
 EXTRACT_SUFX=	.tar.bz2

parallel/py-billiard/Makefile

@@ -1,6 +1,6 @@
-# $NetBSD: Makefile,v 1.10 2014/02/20 00:47:28 rodent Exp $
+# $NetBSD: Makefile,v 1.12 2014/07/16 23:15:12 rodent Exp $
 
-DISTNAME=	billiard-3.3.0.16
+DISTNAME=	billiard-3.3.0.18
 PKGNAME=	${PYPKGPREFIX}-${DISTNAME}
 CATEGORIES=	parallel
 MASTER_SITES=	https://pypi.python.org/packages/source/b/billiard/
@@ -13,8 +13,6 @@ LICENSE=	modified-bsd
 USE_LANGUAGES+=	c
 REPLACE_PYTHON+=	funtests/setup.py funtests/tests/test_multiprocessing.py
 
-PYTHON_VERSIONS_INCOMPATIBLE=	26
-
 .include "../../lang/python/pyversion.mk"
 
 TWO_OR_THREE=	${PYPKGPREFIX:C/([0-9])[0-9]/\1/1}

parallel/py-billiard/distinfo

@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.5 2014/02/18 02:53:37 rodent Exp $
+$NetBSD: distinfo,v 1.7 2014/07/16 23:15:12 rodent Exp $
 
-SHA1 (billiard-3.3.0.16.tar.gz) = e8300652601320de36ad51a66df2fbac66ca174c
-RMD160 (billiard-3.3.0.16.tar.gz) = ac2e88325e366eac38133be6b0d1739ffe7d24d3
-Size (billiard-3.3.0.16.tar.gz) = 150922 bytes
+SHA1 (billiard-3.3.0.18.tar.gz) = a3690bf6a789f4bd0aacffeb88ba90b24b80a764
+RMD160 (billiard-3.3.0.18.tar.gz) = c5e61e2ee51170d21951f98f5eb07f48ae637cb0
+Size (billiard-3.3.0.18.tar.gz) = 150594 bytes

parallel/sge/Makefile

@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.59 2014/02/12 23:18:28 tron Exp $
+# $NetBSD: Makefile,v 1.60 2014/05/29 23:37:14 wiz Exp $
 #
 
 DISTNAME=		sge-8.1.6
-PKGREVISION=		1
+PKGREVISION=		2
 CATEGORIES=		parallel sysutils
 MASTER_SITES=		http://arc.liv.ac.uk/downloads/SGE/releases/8.1.6/
 

parallel/slurm/Makefile

@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.12 2014/03/12 20:17:09 asau Exp $
+# $NetBSD: Makefile,v 1.15 2014/09/13 16:49:27 asau Exp $
 
 DISTNAME=	slurm-2.6.4
-PKGREVISION=	2
+PKGREVISION=	5
 CATEGORIES=	parallel
 MASTER_SITES=	http://www.schedmd.com/download/archive/ \
 		http://www.schedmd.com/download/latest/ \
@@ -30,6 +30,8 @@ PKG_USERS=		slurm:slurm
 PKG_GECOS.slurm=	SLURM user
 PKG_SHELL.slurm=	$(NOLOGIN)
 
+RCD_SCRIPTS+=	slurmd slurmctld
+
 post-install:
 	$(INSTALL_DATA_DIR) $(DESTDIR)$(PREFIX)/share/examples/$(PKGBASE)
 	$(INSTALL_DATA) $(WRKSRC)/etc/* $(DESTDIR)$(PREFIX)/share/examples/$(PKGBASE)/

parallel/slurm/files/slurmctld.sh

@@ -0,0 +1,15 @@
+#!@RCD_SCRIPTS_SHELL@
+# $NetBSD: slurmctld.sh,v 1.1 2014/09/13 16:49:27 asau Exp $
+#
+# PROVIDE: slurmctld
+# REQUIRE: DAEMON munge
+# KEYWORD: shutdown
+
+. /etc/rc.subr
+
+name="slurmctld"
+rcvar=${name}
+command="@PREFIX@/sbin/slurmctld"
+
+load_rc_config $name
+run_rc_command "$1"

parallel/slurm/files/slurmd.sh

@@ -0,0 +1,17 @@
+#!@RCD_SCRIPTS_SHELL@
+# $NetBSD: slurmd.sh,v 1.1 2014/09/13 16:49:27 asau Exp $
+#
+# PROVIDE: slurmd
+# REQUIRE: DAEMON munge
+# KEYWORD: shutdown
+
+. /etc/rc.subr
+
+name="slurmd"
+rcvar=${name}
+command="@PREFIX@/sbin/slurmd"
+
+slurmd_user="slurm"
+
+load_rc_config $name
+run_rc_command "$1"