sambuc/hbp-sp8-mip-local
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Use Stable Config (MIP v2.5.3)

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This commit is contained in:
Lionel Sambuc
2018-02-14 09:55:07 +01:00
parent ddecc8474d
commit 6c91db67ff
4 changed files with 172 additions and 62 deletions
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65
settings.default.sh
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@@ -3,8 +3,8 @@
#############################################################################
# DATABASES
# Service Parameters
: ${DB_IMAGE:="postgres"}
: ${DB_VERSION:=":9.6.5-alpine"}
: ${DB_IMAGE:="hbpmip/postgresraw"}
: ${DB_VERSION:=":v1.2"}
: ${DB_HOST:="db"}
: ${DB_PORT:="5432"}
: ${DB_DATA:="${PWD}/postgres"}
@@ -12,6 +12,10 @@
: ${DB_USER_ADMIN:="postgres"}
: ${DB_PASSWORD_ADMIN:="test"}
: ${DB_UI_IMAGE:="hbpmip/postgresraw-ui"}
: ${DB_UI_VERSION:=":v1.4"}
: ${DB_UI_PORT:="5555"}
# Databases Definitions:
# 1. To add a new DB, copy the last 3 lines below and increment the id
# 2. Add the new number in DB_CREATE_LIST
@@ -34,6 +38,7 @@
# Database setup tools
: ${DB_CREATE_IMAGE:="hbpmip/create-databases"}
: ${DB_CREATE_VERSION:=":1.0.0"}
# List of databases to create
: ${DB_CREATE_LIST:="1 2 3 4"}
@@ -41,16 +46,32 @@
: ${WOKEN_SETUP_VERSION:=":1.0.2"}
: ${WOKEN_SETUP_DB:=${DB_NAME3}}
: ${METADATA_SETUP_IMAGE:="hbpmip/sample-meta-db-setup"}
: ${METADATA_SETUP_VERSION:=":0.4.0"}
#: ${METADATA_SETUP_IMAGE:="hbpmip/sample-meta-db-setup"}
#: ${METADATA_SETUP_VERSION:=":0.4.0"}
: ${METADATA_SETUP_IMAGE:="hbpmip/mip-cde-meta-db-setup"} # Stable Config
: ${METADATA_SETUP_VERSION:=":1.1.1"} # Stable Config
: ${METADATA_SETUP_DB:=${DB_NAME1}}
: ${DATA_SETUP_IMAGE:="hbpmip/sample-data-db-setup"}
: ${DATA_SETUP_VERSION:=":0.5.0"}
: ${DATA_SETUP_DB:=${DB_NAME2}}
: ${SAMPLE_SETUP_IMAGE:="hbpmip/sample-data-db-setup"}
#: ${SAMPLE_SETUP_VERSION:=":0.5.0"}
: ${SAMPLE_SETUP_VERSION:=":0.3.2"} # Stable Config
: ${SAMPLE_SETUP_DB:=${DB_NAME2}}
: ${ADNI_MERGE_SETUP_IMAGE:="registry.gitlab.com/hbpmip_private/adni-merge-db-setup"}
: ${ADNI_MERGE_SETUP_VERSION:=":1.4.2"}
: ${ADNI_MERGE_SETUP_DB:=${DB_NAME2}}
: ${EDSD_SETUP_IMAGE:="registry.gitlab.com/hbpmip_private/edsd-data-db-setup"}
: ${EDSD_SETUP_VERSION:=":1.3.2"}
: ${EDSD_SETUP_DB:=${DB_NAME2}}
: ${PPMI_SETUP_IMAGE:="registry.gitlab.com/hbpmip_private/ppmi-data-db-setup"}
: ${PPMI_SETUP_VERSION:=":1.0.2"}
: ${PPMI_SETUP_DB:=${DB_NAME2}}
# List of databases to populate
: ${DB_SETUP_LIST:="WOKEN_SETUP METADATA_SETUP DATA_SETUP"}
#: ${DB_SETUP_LIST:="WOKEN_SETUP METADATA_SETUP SAMPLE_SETUP"}
: ${DB_SETUP_LIST:="WOKEN_SETUP METADATA_SETUP ADNI_MERGE_SETUP EDSD_SETUP PPMI_SETUP"} # Stable Config
#############################################################################
: ${MIP_PRIVATE_NETWORK:="mip_local"}
@@ -84,33 +105,45 @@
: ${MESOS_SLAVE_TMP:="${PWD}/mesos-slave/tmp"}
: ${CHRONOS_IMAGE:="mesosphere/chronos"}
: ${CHRONOS_VERSION:=":v3.0.2"}
#: ${CHRONOS_VERSION:=":v3.0.2"}
: ${CHRONOS_VERSION:=":chronos-2.5.0-0.1.20170628182950.ubuntu1404-mesos-1.3.0"} # Stable Config
: ${CHRONOS_HOST:="chronos"}
: ${CHRONOS_PORT1:="4400"}
: ${CHRONOS_PORT2:="4401"}
: ${WOKEN_IMAGE:="hbpmip/woken"}
: ${WOKEN_VERSION:=":2.1.4"}
#: ${WOKEN_VERSION:=":2.1.4"}
: ${WOKEN_VERSION:=":2.0.4"} # Stable Config
: ${WOKEN_HOST:="woken"}
: ${WOKEN_PORT1:="8088"}
: ${WOKEN_PORT2:="8087"}
: ${WOKEN_AKKA_PORT:=${WOKEN_PORT1}}
: ${WOKEN_CONF:="${PWD}/woken/application.conf"}
: ${WOKEN_MAIN_TABLE:="cde_features_a"}
#: ${WOKEN_MAIN_TABLE:="cde_features_a"}
: ${WOKEN_MAIN_TABLE:="mip_cde_features"} # Stable Config
: ${WOKEN_EXAREME_URL:="http://prozac.madgik.di.uoa.gr:9090/mining/query"}
#: ${WOKEN_CONTEXT_PATH:="/services"}
: ${WOKEN_CONTEXT_PATH:=""} # Stable Config
: ${WOKEN_VALIDATION_IMAGE:="hbpmip/woken-validation"}
: ${WOKEN_VALIDATION_VERSION:=":2.1.0"}
#: ${WOKEN_VALIDATION_VERSION:=":2.1.0"}
: ${WOKEN_VALIDATION_VERSION:=":2.0.4"} # Stable Config
: ${WOKEN_VALIDATION_HOST:="woken-validation"}
: ${WOKEN_VALIDATION_PORT:="8082"}
: ${WOKEN_VALIDATION_CONF:="${PWD}/woken/validation.conf"}
: ${PORTAL_BACKEND_IMAGE:="hbpmip/portal-backend"}
: ${PORTAL_BACKEND_VERSION:=":2.5.4"}
#: ${PORTAL_BACKEND_VERSION:=":2.5.4"}
: ${PORTAL_BACKEND_VERSION:=":2.4.7"} # Stable Config
: ${PORTAL_BACKEND_AUTHENTICATION:="0"}
: ${PORTAL_BACKEND_CLIENT_ID:="none"}
: ${PORTAL_BACKEND_CLIENT_SECRET:="none"}
#: ${PORTAL_BACKEND_CONTEXT:="services"}
: ${PORTAL_BACKEND_CONTEXT:=""} # Stable Config
: ${PORTAL_FRONTEND_IMAGE:="hbpmip/portal-frontend"}
: ${PORTAL_FRONTEND_VERSION:=":2.6.0"}
: ${PORTAL_FRONTEND_PORT:="80"}
: ${PORTAL_FRONTEND_URL:="http://172.16.22.176:80"}
#: ${PORTAL_FRONTEND_VERSION:=":2.6.0"}
: ${PORTAL_FRONTEND_VERSION:=":2.3.3"} # Stable Config
: ${PORTAL_FRONTEND_PORT1:="80"}
: ${PORTAL_FRONTEND_PORT2:="443"}
: ${PORTAL_FRONTEND_URL:="http://172.16.22.176:${PORTAL_FRONTEND_PORT1}"}